Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain CFBP5506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
386076 bp
Thymine Count
386451 bp
Guanine Count
561882 bp
Cytosine Count
561906 bp
Genome Length
1896315 bp
Protein-coding Genes
1662 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transporter substrate-binding domain-containing protein | CFBP5506_RS14670 | Not Available | Positive | 316504 - 317343 | 29797.7 |
| amino acid abc transporter atp-binding protein | CFBP5506_RS14675 | Not Available | Positive | 317357 - 318118 | 28052.2 |
| shikimate dehydrogenase | CFBP5506_RS14680 | Not Available | Positive | 318191 - 319060 | 31310.7 |
| type ii 3-dehydroquinate dehydratase | CFBP5506_RS14685 | Not Available | Positive | 319057 - 319500 | 16289.4 |
| tetr/acrr family transcriptional regulator | CFBP5506_RS14690 | Not Available | Negative | 319475 - 320167 | 26093.9 |
| bifunctional sugar phosphate isomerase/epimerase/4-hydroxyphenylpyruvate dioxygenase family protein | CFBP5506_RS14695 | Not Available | Positive | 320287 - 322188 | 69939.8 |
| hypothetical protein | CFBP5506_RS14700 | Not Available | Positive | 322555 - 322692 | 4523.25 |
| abc transporter atp-binding protein | CFBP5506_RS14705 | Not Available | Positive | 322828 - 324648 | 66881.5 |
| abc transporter substrate-binding protein | CFBP5506_RS14710 | Not Available | Positive | 324690 - 326225 | 55908.1 |
| abc transporter permease | CFBP5506_RS14715 | Not Available | Positive | 326304 - 327227 | 33087.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


