Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain CFBP5506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
386076 bp
Thymine Count
386451 bp
Guanine Count
561882 bp
Cytosine Count
561906 bp
Genome Length
1896315 bp
Protein-coding Genes
1662 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | CFBP5506_RS14620 | Not Available | Negative | 307690 - 308613 | 34273.4 |
| 4-hydroxybenzoate 3-monooxygenase | CFBP5506_RS14625 | Not Available | Positive | 308731 - 309903 | 43882.1 |
| pca operon transcription factor pcaq | CFBP5506_RS14630 | Not Available | Negative | 309897 - 310841 | 33882.4 |
| 3-oxoadipate enol-lactonase | CFBP5506_RS14635 | Not Available | Positive | 310936 - 311733 | 28485.1 |
| 4-carboxymuconolactone decarboxylase | CFBP5506_RS14640 | Not Available | Positive | 311737 - 312171 | 15570.3 |
| protocatechuate 3,4-dioxygenase subunit beta | CFBP5506_RS14645 | Not Available | Positive | 312168 - 312908 | 27755.3 |
| protocatechuate 3,4-dioxygenase subunit alpha | CFBP5506_RS14650 | Not Available | Positive | 312911 - 313531 | 22847.1 |
| 3-carboxy-cis,cis-muconate cycloisomerase | CFBP5506_RS14655 | Not Available | Positive | 313600 - 314661 | 37531.9 |
| amino acid abc transporter permease | CFBP5506_RS14660 | Not Available | Positive | 315135 - 315803 | 24081.3 |
| amino acid abc transporter permease | CFBP5506_RS14665 | Not Available | Positive | 315814 - 316464 | 22968.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


