Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain CFBP5506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
386076 bp
Thymine Count
386451 bp
Guanine Count
561882 bp
Cytosine Count
561906 bp
Genome Length
1896315 bp
Protein-coding Genes
1662 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CFBP5506_RS14525 | Not Available | Negative | 287589 - 289379 | 72586.0 |
| fic family protein | CFBP5506_RS21810 | Not Available | Negative | 289690 - 289821 | 4914.76 |
| tolc family outer membrane protein | CFBP5506_RS14535 | Not Available | Negative | 290358 - 291785 | 51684.1 |
| fic family protein | CFBP5506_RS14540 | Not Available | Positive | 292282 - 292494 | 7735.23 |
| abc transporter substrate-binding protein | CFBP5506_RS14545 | Not Available | Positive | 293285 - 294274 | 34502.3 |
| abc transporter atp-binding protein | CFBP5506_RS14550 | Not Available | Positive | 294280 - 295053 | 28250.5 |
| abc transporter permease | CFBP5506_RS14555 | Not Available | Positive | 295058 - 295855 | 28400.0 |
| isopenicillin n synthase family dioxygenase | CFBP5506_RS14560 | Not Available | Positive | 295942 - 296937 | 37707.8 |
| lysr family transcriptional regulator | CFBP5506_RS14565 | Not Available | Positive | 296940 - 297911 | 35597.6 |
| cytosine deaminase | CFBP5506_RS14570 | Not Available | Positive | 297943 - 299295 | 48703.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


