Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain CFBP5506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
386076 bp
Thymine Count
386451 bp
Guanine Count
561882 bp
Cytosine Count
561906 bp
Genome Length
1896315 bp
Protein-coding Genes
1662 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fic family protein | CFBP5506_RS14425 | Not Available | Positive | 257114 - 257278 | 6389.87 |
| alanine/glycine:cation symporter family protein | CFBP5506_RS14430 | Not Available | Positive | 257481 - 258929 | 50761.6 |
| sigma-70 family rna polymerase sigma factor | CFBP5506_RS21805 | Not Available | Positive | 259282 - 259788 | 19207.6 |
| fecr family protein | CFBP5506_RS14440 | Not Available | Positive | 259872 - 260840 | 35335.9 |
| tonb-dependent siderophore receptor | CFBP5506_RS14445 | Not Available | Positive | 260949 - 263384 | 86930.3 |
| mfs transporter | CFBP5506_RS14450 | Not Available | Positive | 263384 - 264607 | 42437.9 |
| phosphatase pap2 family protein | CFBP5506_RS14455 | Not Available | Negative | 264664 - 266646 | 69248.4 |
| abc transporter substrate-binding protein | CFBP5506_RS14460 | Not Available | Negative | 266860 - 268140 | 46751.5 |
| hypothetical protein | CFBP5506_RS14465 | Not Available | Positive | 268335 - 270857 | 92330.1 |
| glycoside hydrolase family 88 protein | CFBP5506_RS14470 | Not Available | Positive | 270871 - 271965 | 41034.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


