Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain CFBP5506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
386076 bp
Thymine Count
386451 bp
Guanine Count
561882 bp
Cytosine Count
561906 bp
Genome Length
1896315 bp
Protein-coding Genes
1662 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ectoine/hydroxyectoine abc transporter substrate-binding protein ehub | CFBP5506_RS13425 | Not Available | Positive | 11772 - 12623 | 30304.1 |
| ectoine/hydroxyectoine abc transporter permease subunit ehuc | CFBP5506_RS13430 | Not Available | Positive | 12684 - 13349 | 24112.2 |
| ectoine/hydroxyectoine abc transporter permease subunit ehud | CFBP5506_RS13435 | Not Available | Positive | 13362 - 14054 | 25392.0 |
| ectoine/hydroxyectoine abc transporter atp-binding protein ehua | CFBP5506_RS13440 | Not Available | Positive | 14051 - 14830 | 29156.5 |
| hypothetical protein | CFBP5506_RS13445 | Not Available | Negative | 14845 - 15840 | 36422.5 |
| sugar phosphate isomerase/epimerase family protein | CFBP5506_RS13450 | Not Available | Negative | 16000 - 16869 | 31618.5 |
| nucleoside triphosphate hydrolase | CFBP5506_RS13455 | Not Available | Negative | 16936 - 17601 | 24203.8 |
| sugar phosphate isomerase/epimerase family protein | CFBP5506_RS13460 | Not Available | Negative | 17628 - 18476 | 30825.7 |
| abc transporter permease | CFBP5506_RS13465 | Not Available | Negative | 18478 - 19473 | 34478.7 |
| abc transporter permease | CFBP5506_RS13470 | Not Available | Negative | 19470 - 20486 | 36290.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


