Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain CFBP5506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
386076 bp
Thymine Count
386451 bp
Guanine Count
561882 bp
Cytosine Count
561906 bp
Genome Length
1896315 bp
Protein-coding Genes
1662 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | CFBP5506_RS14225 | Not Available | Negative | 205672 - 206943 | 45260.9 |
| fad-dependent oxidoreductase | CFBP5506_RS14230 | Not Available | Negative | 206993 - 208594 | 59184.0 |
| laci family dna-binding transcriptional regulator | CFBP5506_RS14235 | Not Available | Negative | 208600 - 209670 | 38200.9 |
| atp-dependent helicase | CFBP5506_RS14240 | Not Available | Positive | 209948 - 212014 | 76818.0 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | CFBP5506_RS14245 | Not Available | Positive | 212310 - 212879 | 20978.6 |
| dtdp-glucose 4,6-dehydratase | CFBP5506_RS14250 | Not Available | Positive | 212882 - 213937 | 39007.1 |
| dtdp-4-dehydrorhamnose reductase | CFBP5506_RS14255 | Not Available | Positive | 213942 - 214835 | 31841.6 |
| glucose-1-phosphate thymidylyltransferase rfba | CFBP5506_RS14260 | Not Available | Positive | 214832 - 215698 | 31432.7 |
| glycosyltransferase family 2 protein | CFBP5506_RS14265 | Not Available | Positive | 215820 - 216665 | 30752.2 |
| nad-dependent epimerase/dehydratase family protein | CFBP5506_RS14270 | Not Available | Negative | 216692 - 217606 | 32733.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


