Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain CFBP5506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
386076 bp
Thymine Count
386451 bp
Guanine Count
561882 bp
Cytosine Count
561906 bp
Genome Length
1896315 bp
Protein-coding Genes
1662 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent siderophore receptor | CFBP5506_RS14025 | Not Available | Positive | 152006 - 154126 | 77669.3 |
| helix-turn-helix domain-containing protein | CFBP5506_RS14030 | Not Available | Negative | 154243 - 155136 | 33015.6 |
| hypothetical protein | CFBP5506_RS14035 | Not Available | Positive | 155353 - 155529 | 6129.0 |
| catalase/peroxidase hpi | CFBP5506_RS14040 | Not Available | Negative | 155686 - 157857 | 78881.5 |
| hydrogen peroxide-inducible genes activator | CFBP5506_RS14045 | Not Available | Positive | 158066 - 158974 | 33240.9 |
| fic family protein | CFBP5506_RS14050 | Not Available | Positive | 159026 - 159187 | 6091.53 |
| shlb/fhac/hecb family hemolysin secretion/activation protein | CFBP5506_RS14055 | Not Available | Positive | 159971 - 161632 | 60483.1 |
| invasion associated locus b family protein | CFBP5506_RS14060 | Not Available | Positive | 161735 - 162295 | 19112.2 |
| chan family lipoprotein | CFBP5506_RS14065 | Not Available | Positive | 162388 - 163248 | 31503.6 |
| filamentous hemagglutinin n-terminal domain-containing protein | CFBP5506_RS14070 | Not Available | Positive | 163254 - 165245 | 68635.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


