Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain CFBP5506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
386076 bp
Thymine Count
386451 bp
Guanine Count
561882 bp
Cytosine Count
561906 bp
Genome Length
1896315 bp
Protein-coding Genes
1662 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding cassette domain-containing protein | CFBP5506_RS18960 | Not Available | Positive | 1267625 - 1268407 | 27949.8 |
| hypothetical protein | CFBP5506_RS18965 | Not Available | Negative | 1268594 - 1268827 | 8235.87 |
| helix-turn-helix domain-containing protein | CFBP5506_RS18970 | Not Available | Negative | 1268922 - 1269359 | 15062.0 |
| hypothetical protein | CFBP5506_RS18975 | Not Available | Negative | 1269486 - 1270631 | 40898.1 |
| tfua-like protein | CFBP5506_RS18980 | Not Available | Negative | 1270628 - 1271341 | 24731.5 |
| ycao-like family protein | CFBP5506_RS18985 | Not Available | Negative | 1271338 - 1272558 | 43405.7 |
| hypothetical protein | CFBP5506_RS18990 | Not Available | Negative | 1272575 - 1273003 | 14757.5 |
| btad domain-containing putative transcriptional regulator | CFBP5506_RS18995 | Not Available | Negative | 1273012 - 1274964 | 72425.5 |
| hypothetical protein | CFBP5506_RS19000 | Not Available | Positive | 1275137 - 1275628 | 18827.3 |
| hypothetical protein | CFBP5506_RS19005 | Not Available | Positive | 1275719 - 1276090 | 13710.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


