Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain CFBP5506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
386076 bp
Thymine Count
386451 bp
Guanine Count
561882 bp
Cytosine Count
561906 bp
Genome Length
1896315 bp
Protein-coding Genes
1662 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa carboxylase subunit beta | CFBP5506_RS18910 | Not Available | Positive | 1254030 - 1255562 | 55805.8 |
| glutathione-dependent disulfide-bond oxidoreductase | CFBP5506_RS18915 | Not Available | Positive | 1255665 - 1256561 | 32881.9 |
| hypothetical protein | CFBP5506_RS18920 | Not Available | Positive | 1256665 - 1257042 | 14391.3 |
| acetyl/propionyl/methylcrotonyl-coa carboxylase subunit alpha | CFBP5506_RS18925 | Not Available | Positive | 1257088 - 1259091 | 72231.7 |
| methylmalonyl-coa mutase | CFBP5506_RS18930 | Not Available | Positive | 1259225 - 1261366 | 77413.6 |
| methylmalonyl-coa epimerase | CFBP5506_RS18935 | Not Available | Positive | 1261380 - 1261796 | 14725.7 |
| glycerol-3-phosphate dehydrogenase | CFBP5506_RS18940 | Not Available | Positive | 1261970 - 1263514 | 57153.1 |
| rok family transcriptional regulator | CFBP5506_RS18945 | Not Available | Negative | 1263534 - 1264766 | 43722.8 |
| d-xylose abc transporter substrate-binding protein | CFBP5506_RS18950 | Not Available | Positive | 1265011 - 1266051 | 36188.0 |
| sugar abc transporter permease | CFBP5506_RS18955 | Not Available | Positive | 1266293 - 1267606 | 46098.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


