Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain CFBP5506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
386076 bp
Thymine Count
386451 bp
Guanine Count
561882 bp
Cytosine Count
561906 bp
Genome Length
1896315 bp
Protein-coding Genes
1662 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| electron transfer flavoprotein subunit alpha/fixb family protein | CFBP5506_RS18860 | Not Available | Negative | 1245510 - 1246439 | 31249.4 |
| electron transfer flavoprotein subunit beta/fixa family protein | CFBP5506_RS18865 | Not Available | Negative | 1246465 - 1247211 | 26371.3 |
| rhomboid family intramembrane serine protease | CFBP5506_RS18870 | Not Available | Negative | 1247396 - 1248169 | 28119.9 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | CFBP5506_RS18875 | Not Available | Negative | 1248202 - 1248780 | 20995.2 |
| twin transmembrane helix small protein | CFBP5506_RS18880 | Not Available | Negative | 1248782 - 1248979 | 7131.36 |
| sdr family oxidoreductase | CFBP5506_RS18885 | Not Available | Negative | 1248996 - 1249829 | 30236.8 |
| yihy/virulence factor brkb family protein | CFBP5506_RS18890 | Not Available | Positive | 1250006 - 1250923 | 33244.1 |
| trna glutamyl-q(34) synthetase gluqrs | CFBP5506_RS18895 | Not Available | Negative | 1250891 - 1251790 | 33297.6 |
| dna-3-methyladenine glycosylase family protein | CFBP5506_RS18900 | Not Available | Positive | 1251830 - 1252486 | 23354.5 |
| helix-turn-helix domain-containing protein | CFBP5506_RS18905 | Not Available | Negative | 1252493 - 1253911 | 52372.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


