Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain CFBP5506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
386076 bp
Thymine Count
386451 bp
Guanine Count
561882 bp
Cytosine Count
561906 bp
Genome Length
1896315 bp
Protein-coding Genes
1662 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | CFBP5506_RS13875 | Not Available | Negative | 116797 - 118464 | 61654.8 |
| abc transporter permease | CFBP5506_RS13880 | Not Available | Negative | 118477 - 119595 | 40507.8 |
| abc transporter permease | CFBP5506_RS13885 | Not Available | Negative | 119615 - 120622 | 36726.4 |
| abc transporter substrate-binding protein | CFBP5506_RS13890 | Not Available | Negative | 120767 - 122854 | 77486.6 |
| alpha-glucosidase/alpha-galactosidase | CFBP5506_RS13895 | Not Available | Negative | 122960 - 124426 | 53936.8 |
| arac family transcriptional regulator | CFBP5506_RS13900 | Not Available | Positive | 124624 - 125511 | 33214.6 |
| hypothetical protein | CFBP5506_RS13905 | Not Available | Positive | 125588 - 126049 | 17608.9 |
| dmt family transporter | CFBP5506_RS13910 | Not Available | Negative | 126065 - 126976 | 33174.5 |
| pig-l family deacetylase | CFBP5506_RS13915 | Not Available | Negative | 126973 - 129375 | 86948.5 |
| rok family transcriptional regulator | CFBP5506_RS13920 | Not Available | Negative | 129395 - 130621 | 42757.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


