Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain CFBP5506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
386076 bp
Thymine Count
386451 bp
Guanine Count
561882 bp
Cytosine Count
561906 bp
Genome Length
1896315 bp
Protein-coding Genes
1662 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| j domain-containing protein | CFBP5506_RS18710 | Not Available | Positive | 1217491 - 1218114 | 23489.7 |
| cobaltochelatase subunit cobs | CFBP5506_RS18715 | Not Available | Positive | 1218183 - 1219172 | 36719.7 |
| cobaltochelatase subunit cobt | CFBP5506_RS18720 | Not Available | Positive | 1219279 - 1221183 | 70359.7 |
| esterase-like activity of phytase family protein | CFBP5506_RS18725 | Not Available | Positive | 1221221 - 1222198 | 35132.5 |
| pentapeptide repeat-containing protein | CFBP5506_RS18730 | Not Available | Negative | 1222201 - 1222536 | 11645.6 |
| queuosine precursor transporter | CFBP5506_RS18735 | Not Available | Negative | 1222627 - 1223271 | 23303.0 |
| 50s ribosomal protein l28 | CFBP5506_RS18740 | Not Available | Negative | 1223435 - 1223725 | 10605.0 |
| hypothetical protein | CFBP5506_RS18745 | Not Available | Positive | 1223724 - 1223942 | 8126.97 |
| duf3108 domain-containing protein | CFBP5506_RS18750 | Not Available | Positive | 1223978 - 1224751 | 27940.5 |
| cupin domain-containing protein | CFBP5506_RS18755 | Not Available | Negative | 1224960 - 1225400 | 15985.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


