Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain CFBP5506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
386076 bp
Thymine Count
386451 bp
Guanine Count
561882 bp
Cytosine Count
561906 bp
Genome Length
1896315 bp
Protein-coding Genes
1662 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan-associated lipoprotein pal | CFBP5506_RS18410 | Not Available | Positive | 1153488 - 1154021 | 18847.4 |
| tol-pal system protein ybgf | CFBP5506_RS18415 | Not Available | Positive | 1154180 - 1155184 | 35059.3 |
| trna lysidine(34) synthetase tils | CFBP5506_RS18420 | Not Available | Positive | 1155212 - 1156549 | 48845.5 |
| atp-dependent zinc metalloprotease ftsh | CFBP5506_RS18425 | Not Available | Positive | 1156704 - 1158668 | 71141.3 |
| phosphoglucosamine mutase | CFBP5506_RS18430 | Not Available | Positive | 1158859 - 1160211 | 48357.2 |
| hypothetical protein | CFBP5506_RS18435 | Not Available | Positive | 1160297 - 1160494 | 7110.7 |
| zn-dependent hydrolase | CFBP5506_RS18440 | Not Available | Negative | 1160513 - 1161793 | 45890.8 |
| btpa/sgcq family protein | CFBP5506_RS18445 | Not Available | Negative | 1161807 - 1162649 | 29825.7 |
| ribokinase | CFBP5506_RS18450 | Not Available | Positive | 1162674 - 1163570 | 30436.5 |
| glutamine amidotransferase | CFBP5506_RS18455 | Not Available | Negative | 1163580 - 1164350 | 28315.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


