Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain CFBP5506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
386076 bp
Thymine Count
386451 bp
Guanine Count
561882 bp
Cytosine Count
561906 bp
Genome Length
1896315 bp
Protein-coding Genes
1662 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| holliday junction branch migration dna helicase ruvb | CFBP5506_RS18360 | Not Available | Positive | 1145862 - 1146902 | 38197.3 |
| duf2945 domain-containing protein | CFBP5506_RS18365 | Not Available | Positive | 1146955 - 1147173 | 8057.49 |
| dinb family protein | CFBP5506_RS18370 | Not Available | Positive | 1147210 - 1147791 | 21880.1 |
| nudix hydrolase | CFBP5506_RS18375 | Not Available | Positive | 1147788 - 1148312 | 20467.3 |
| nudix hydrolase | CFBP5506_RS18380 | Not Available | Positive | 1148309 - 1148845 | 20602.7 |
| tol-pal system-associated acyl-coa thioesterase | CFBP5506_RS18385 | Not Available | Positive | 1148842 - 1149282 | 16539.1 |
| protein tolq | CFBP5506_RS18390 | Not Available | Positive | 1149544 - 1150263 | 25919.4 |
| protein tolr | CFBP5506_RS18395 | Not Available | Positive | 1150316 - 1150771 | 15694.0 |
| hypothetical protein | CFBP5506_RS18400 | Not Available | Positive | 1150781 - 1151950 | 41372.4 |
| tol-pal system beta propeller repeat protein tolb | CFBP5506_RS18405 | Not Available | Positive | 1151971 - 1153278 | 48188.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


