Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain CFBP5506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
386076 bp
Thymine Count
386451 bp
Guanine Count
561882 bp
Cytosine Count
561906 bp
Genome Length
1896315 bp
Protein-coding Genes
1662 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hemolysin family protein | CFBP5506_RS18310 | Not Available | Positive | 1135594 - 1136856 | 45326.4 |
| 5-formyltetrahydrofolate cyclo-ligase | CFBP5506_RS18315 | Not Available | Positive | 1136856 - 1137473 | 21916.3 |
| tigr00282 family metallophosphoesterase | CFBP5506_RS18320 | Not Available | Positive | 1137547 - 1138371 | 29605.2 |
| mbl fold metallo-hydrolase | CFBP5506_RS18325 | Not Available | Positive | 1138488 - 1139330 | 30670.2 |
| pyridoxamine 5'-phosphate oxidase family protein | CFBP5506_RS18330 | Not Available | Negative | 1139369 - 1139872 | 18718.0 |
| yebc/pmpr family dna-binding transcriptional regulator | CFBP5506_RS18335 | Not Available | Positive | 1140069 - 1140815 | 26851.5 |
| llm class flavin-dependent oxidoreductase | CFBP5506_RS18340 | Not Available | Negative | 1140869 - 1141870 | 36671.0 |
| methyl-accepting chemotaxis protein | CFBP5506_RS18345 | Not Available | Negative | 1142015 - 1144324 | 82429.8 |
| crossover junction endodeoxyribonuclease ruvc | CFBP5506_RS18350 | Not Available | Positive | 1144573 - 1145085 | 18134.1 |
| holliday junction branch migration protein ruva | CFBP5506_RS18355 | Not Available | Positive | 1145118 - 1145735 | 21336.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


