Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain CFBP5506 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
386076 bp
Thymine Count
386451 bp
Guanine Count
561882 bp
Cytosine Count
561906 bp
Genome Length
1896315 bp
Protein-coding Genes
1662 genes
Non-Coding Genes
20 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | CFBP5506_RS13370 | Not Available | + | 111 - 1319 | 40864.6 |
| fic family protein | CFBP5506_RS21800 | Not Available | + | 1494 - 2302 | 29350.8 |
| lrp/asnc family transcriptional regulator | CFBP5506_RS13385 | Not Available | - | 2326 - 2793 | 17616.4 |
| nad-dependent succinate-semialdehyde dehydrogenase | CFBP5506_RS13390 | Not Available | + | 2915 - 4393 | 52635.3 |
| aspartate aminotransferase family protein | CFBP5506_RS13395 | Not Available | + | 4407 - 5810 | 50451.5 |
| plp-dependent aminotransferase family protein | CFBP5506_RS13400 | Not Available | + | 5971 - 7419 | 52267.2 |
| hydroxyectoine utilization dehydratase eutb | CFBP5506_RS13405 | Not Available | + | 7488 - 8507 | 34824.2 |
| ectoine utilization protein eutc | CFBP5506_RS13410 | Not Available | + | 8504 - 9517 | 35778.1 |
| ectoine hydrolase doea | CFBP5506_RS13415 | Not Available | + | 9514 - 10692 | 43714.2 |
| n(2)-acetyl-l-2,4-diaminobutanoate deacetylase doeb | CFBP5506_RS13420 | Not Available | + | 10697 - 11710 | 35532.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.


