Agrobacterium tumefaciens strain CFBP5506

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Agrobacterium tumefaciens strain CFBP5506 is a Gram-negative, rod-shaped bacterium that thrives in aerobic conditions, with an optimal growth temperature of 25.0°C. This strain is part of the Agrobacterium genus, which is known for its capacity to interact with various plant species. Its habitat encompasses multiple environments, suggesting a degree of ecological versatility that could facilitate its survival and proliferation in diverse niches. The rod shape and aerobic nature of A. tumefaciens CFBP5506 indicate its adaptation to environments where oxygen is readily available, potentially influencing its interactions with plant hosts and other microorganisms. This strain's metabolic capabilities, typical of many members of the Agrobacterium genus, may allow it to exploit organic compounds found in its habitat, contributing to nutrient cycling. Overall, the ecological implications of A. tumefaciens CFBP5506's traits suggest that it may play a significant role in soil health and the dynamics of plant-microbe interactions, particularly in environments where it can efficiently colonize plant tissues and contribute to the complex web of microbial life. Further studies could elucidate its specific ecological roles and contributions to plant health and soil fertility.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium tumefaciens
Strainstrain CFBP5506

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Agrobacterium tumefaciens strain CFBP5506
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium tumefaciens strain CFBP5506


Gene Summary

Adenine Count

386076 bp

Thymine Count

386451 bp

Guanine Count

561882 bp

Cytosine Count

561906 bp

Genome Length

1896315 bp

Protein-coding Genes

1662 genes

Non-Coding Genes

20 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
mfs transporterCFBP5506_RS13370Not Available+111 - 131940864.6
fic family proteinCFBP5506_RS21800Not Available+1494 - 230229350.8
lrp/asnc family transcriptional regulatorCFBP5506_RS13385Not Available-2326 - 279317616.4
nad-dependent succinate-semialdehyde dehydrogenaseCFBP5506_RS13390Not Available+2915 - 439352635.3
aspartate aminotransferase family proteinCFBP5506_RS13395Not Available+4407 - 581050451.5
plp-dependent aminotransferase family proteinCFBP5506_RS13400Not Available+5971 - 741952267.2
hydroxyectoine utilization dehydratase eutbCFBP5506_RS13405Not Available+7488 - 850734824.2
ectoine utilization protein eutcCFBP5506_RS13410Not Available+8504 - 951735778.1
ectoine hydrolase doeaCFBP5506_RS13415Not Available+9514 - 1069243714.2
n(2)-acetyl-l-2,4-diaminobutanoate deacetylase doebCFBP5506_RS13420Not Available+10697 - 1171035532.4

Displaying genes 1 – 10 of 1682 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites