Rhodopseudomonas palustris CGA009

Gram-negativeBacilliMotileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Rhodopseudomonas

Description

Rhodopseudomonas palustris CGA009 is a Gram-negative, bacilli-shaped bacterium known for its versatility in energy acquisition, functioning primarily as a phototroph. This species exhibits a facultative oxygen requirement, enabling it to thrive in diverse environments, including both aerobic and anaerobic conditions. R. palustris CGA009 typically exists as single cells and is motile, possessing flagella that facilitate movement. This bacterium is mesophilic, with an optimal growth temperature of 25°C, indicating its preference for moderate temperatures conducive to biological activity. R. palustrons CGA009 features a unique cellular structure comprising two membranes and two replicons, which may play roles in its metabolic processes and adaptability to different habitats. The free-living nature of R. palustris CGA009 highlights its ecological significance, as it can occupy various niches without reliance on a host. Importantly, this bacterium is non-pathogenic, making it a safe organism for study and potential applications in biotechnology and environmental science. The multi-faceted energy utilization and adaptability of R. palustris CGA009 suggest its potential roles in biogeochemical cycles and its ability to contribute to ecosystem dynamics. Its capabilities as a phototroph may also offer insights into sustainable practices in agriculture and bioremediation, particularly in environments impacted by pollutants. Overall, R. palustris CGA009 exemplifies the ecological importance of free-living bacteria in diverse habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusRhodopseudomonas
SpeciesRhodopseudomonas palustris
StrainCGA009

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Rhodopseudomonas palustris CGA009
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourcePhototroph
PathogenicityNo

Genome Summary

Rhodopseudomonas palustris CGA009 chromosome, complete genome.

Gene Summary

Adenine Count

952761 bp

Thymine Count

955882 bp

Guanine Count

1778169 bp

Cytosine Count

1772402 bp

Genome Length

5459214 bp

Protein-coding Genes

4954 genes

Non-Coding Genes

73 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ycei family proteinTX73_RS22200Not AvailablePositive4833017 - 483365822808.4
malonic semialdehyde reductaseTX73_RS22205Not AvailablePositive4833735 - 483432521552.7
doda-type extradiol aromatic ring-opening family dioxygenaseTX73_RS22210Not AvailablePositive4834368 - 483517128565.9
class i sam-dependent methyltransferaseTX73_RS22215Not AvailableNegative4835542 - 483617423584.0
type iii effector hopag1TX73_RS22220Not AvailablePositive4836257 - 483708428765.8
cyclin-dependent kinase inhibitor 3 family proteinTX73_RS22225Not AvailablePositive4837084 - 483764120231.6
phosphate-starvation-inducible protein psieTX73_RS22230Not AvailablePositive4837774 - 483822316523.7
light-harvesting antenna lh1, beta subunitTX73_RS22235Not AvailablePositive4838559 - 48387145731.86
light-harvesting proteinTX73_RS22240Not AvailablePositive4838727 - 48389276824.4
hypothetical proteinTX73_RS22245Not AvailablePositive4839396 - 48396147684.14

Displaying genes 4441 – 4450 of 5036 in total

Metabolites

1012 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm00005166-deoxyerythronolide BC21H38O6Chemical structure of 6-deoxyerythronolide BNot available
Average386.5228Da
Monoisotopic386.2668389Da

Displaying 1–10 of 1012 metabolites

Health Effects

No health effects information available for this bacterium.