Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium pusense |
| Strain | strain CFBP5496 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | desert soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Cicer arietinum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
620584 bp
Thymine Count
617670 bp
Guanine Count
892235 bp
Cytosine Count
903850 bp
Genome Length
3034339 bp
Protein-coding Genes
2769 genes
Non-Coding Genes
260 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system vapb family antitoxin | CFBP5496_RS04130 | Not Available | Negative | 793901 - 794131 | 8456.93 |
| amp nucleosidase | CFBP5496_RS04135 | Not Available | Negative | 794197 - 795702 | 55081.8 |
| hypothetical protein | CFBP5496_RS04140 | Not Available | Negative | 795806 - 795979 | 5903.46 |
| hypothetical protein | CFBP5496_RS04145 | Not Available | Negative | 795990 - 796172 | 6365.99 |
| aaa family atpase | CFBP5496_RS04150 | Not Available | Negative | 796314 - 796910 | 22083.5 |
| duf2147 domain-containing protein | CFBP5496_RS04155 | Not Available | Negative | 797070 - 797408 | 11479.0 |
| sel1 repeat family protein | CFBP5496_RS04160 | Not Available | Positive | 798010 - 798273 | 9477.48 |
| pyridoxal phosphate-dependent aminotransferase | CFBP5496_RS04165 | Not Available | Negative | 798582 - 799694 | 39384.3 |
| hypothetical protein | CFBP5496_RS04170 | Not Available | Negative | 799855 - 800202 | 13285.2 |
| nad(p)/fad-dependent oxidoreductase | CFBP5496_RS04175 | Not Available | Positive | 800526 - 801743 | 44059.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

