Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium pusense |
| Strain | strain CFBP5496 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | desert soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Cicer arietinum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
620584 bp
Thymine Count
617670 bp
Guanine Count
892235 bp
Cytosine Count
903850 bp
Genome Length
3034339 bp
Protein-coding Genes
2769 genes
Non-Coding Genes
260 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c maturation protein ccme | CFBP5496_RS03980 | Not Available | Positive | 756268 - 756780 | 17970.6 |
| heme lyase ccmf/nrfe family subunit | CFBP5496_RS03985 | Not Available | Positive | 756777 - 758768 | 72110.3 |
| cytochrome c-type biogenesis protein ccmh | CFBP5496_RS03990 | Not Available | Positive | 758954 - 759409 | 17033.8 |
| do family serine endopeptidase | CFBP5496_RS03995 | Not Available | Positive | 759563 - 761116 | 53731.8 |
| response regulator transcription factor | CFBP5496_RS04000 | Not Available | Positive | 761388 - 762146 | 28412.5 |
| sensor histidine kinase | CFBP5496_RS04005 | Not Available | Positive | 762156 - 763565 | 50869.5 |
| mipa/ompv family protein | CFBP5496_RS04010 | Not Available | Negative | 763626 - 764489 | 30586.6 |
| bifunctional | CFBP5496_RS04015 | Not Available | Positive | 764808 - 767774 | 109017.0 |
| pas domain-containing sensor histidine kinase | CFBP5496_RS04020 | Not Available | Negative | 768032 - 770368 | 85461.2 |
| carboxymuconolactone decarboxylase family protein | CFBP5496_RS04025 | Not Available | Negative | 770605 - 770925 | 10932.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

