Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium pusense |
| Strain | strain CFBP5496 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | desert soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Cicer arietinum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
620584 bp
Thymine Count
617670 bp
Guanine Count
892235 bp
Cytosine Count
903850 bp
Genome Length
3034339 bp
Protein-coding Genes
2769 genes
Non-Coding Genes
260 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf899 domain-containing protein | CFBP5496_RS03090 | Not Available | Positive | 609705 - 610433 | 27585.4 |
| duf1579 domain-containing protein | CFBP5496_RS03095 | Not Available | Positive | 610463 - 610951 | 18079.1 |
| voc family protein | CFBP5496_RS03100 | Not Available | Positive | 611045 - 611824 | 28515.7 |
| lysr family transcriptional regulator | CFBP5496_RS03105 | Not Available | Negative | 611864 - 612760 | 32996.4 |
| sdr family oxidoreductase | CFBP5496_RS03110 | Not Available | Positive | 612882 - 613604 | 25467.8 |
| carboxymuconolactone decarboxylase family protein | CFBP5496_RS03115 | Not Available | Positive | 613615 - 614091 | 17152.6 |
| atu4866 domain-containing protein | CFBP5496_RS03120 | Not Available | Positive | 614088 - 614438 | 13034.0 |
| helicase hera-like c-terminal domain-containing protein | CFBP5496_RS03125 | Not Available | Negative | 614495 - 616066 | 56755.5 |
| hypothetical protein | CFBP5496_RS03130 | Not Available | Positive | 616379 - 616771 | 12964.7 |
| winged helix-turn-helix transcriptional regulator | CFBP5496_RS03135 | Not Available | Negative | 616778 - 617209 | 16200.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

