Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium pusense |
| Strain | strain CFBP5496 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | desert soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Cicer arietinum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
620584 bp
Thymine Count
617670 bp
Guanine Count
892235 bp
Cytosine Count
903850 bp
Genome Length
3034339 bp
Protein-coding Genes
2769 genes
Non-Coding Genes
260 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| porin | CFBP5496_RS00795 | Not Available | Negative | 148659 - 149684 | 36357.8 |
| Putative atp-dependent dna ligase | CFBP5496_RS00800 | Not Available | Positive | 150056 - 151097 | 38885.8 |
| Attr | Not Available | Not Available | Positive | 152887 - 152901 | Not Available |
| Short chain dehydrogenase | CFBP5496_RS03140 | Not Available | Positive | 617313 - 618071 | 26940.7 |
| Arac family transcriptional regulator | CFBP5496_RS03145 | Not Available | Positive | 618142 - 618981 | 30064.1 |
| duf2513 domain-containing protein | CFBP5496_RS03150 | Not Available | Negative | 619187 - 619651 | 17412.3 |
| Adenine specific dna methyltransferase | CFBP5496_RS03155 | Not Available | Negative | 619674 - 620224 | 19977.7 |
| Hypothetical protein | CFBP5496_RS03160 | Not Available | Negative | 620391 - 620615 | 8876.58 |
| Tail protein | CFBP5496_RS03165 | Not Available | Negative | 620713 - 621294 | 20535.3 |
| Tail fiber domain-containing protein | CFBP5496_RS03170 | Not Available | Negative | 621298 - 622632 | 46883.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

