Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium pusense |
| Strain | strain CFBP5496 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | desert soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Cicer arietinum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
620584 bp
Thymine Count
617670 bp
Guanine Count
892235 bp
Cytosine Count
903850 bp
Genome Length
3034339 bp
Protein-coding Genes
2769 genes
Non-Coding Genes
260 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fadr/gntr family transcriptional regulator | CFBP5496_RS23755 | Not Available | Negative | 1837375 - 1838112 | 26644.7 |
| nad-dependent epimerase/dehydratase family protein | CFBP5496_RS23760 | Not Available | Negative | 1838220 - 1839017 | 28981.6 |
| 5-dehydro-4-deoxy-d-glucuronate isomerase | CFBP5496_RS23765 | Not Available | Positive | 1839155 - 1839979 | 30393.1 |
| 2-dehydro-3-deoxy-d-gluconate 5-dehydrogenase kdud | CFBP5496_RS23770 | Not Available | Positive | 1839976 - 1840719 | 25637.5 |
| 5-dehydro-4-deoxyglucarate dehydratase | CFBP5496_RS23775 | Not Available | Positive | 1840832 - 1841743 | 32472.1 |
| d-galactarolactone cycloisomerase | CFBP5496_RS23780 | Not Available | Positive | 1841767 - 1842903 | 41392.5 |
| d-galactarolactone isomerase | CFBP5496_RS23785 | Not Available | Positive | 1842900 - 1843778 | 32020.2 |
| trap transporter substrate-binding protein | CFBP5496_RS23790 | Not Available | Positive | 1843923 - 1844900 | 35974.5 |
| trap transporter small permease | CFBP5496_RS23795 | Not Available | Positive | 1844971 - 1845492 | 18901.5 |
| trap transporter large permease | CFBP5496_RS23800 | Not Available | Positive | 1845493 - 1846773 | 44975.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

