Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium pusense |
| Strain | strain CFBP5496 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | desert soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Cicer arietinum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
620584 bp
Thymine Count
617670 bp
Guanine Count
892235 bp
Cytosine Count
903850 bp
Genome Length
3034339 bp
Protein-coding Genes
2769 genes
Non-Coding Genes
260 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter permease | CFBP5496_RS23405 | Not Available | Negative | 1761556 - 1762206 | 23018.8 |
| amino acid abc transporter permease | CFBP5496_RS23410 | Not Available | Negative | 1762219 - 1762887 | 24123.3 |
| 3-carboxy-cis,cis-muconate cycloisomerase | CFBP5496_RS23415 | Not Available | Negative | 1763229 - 1764317 | 38373.1 |
| protocatechuate 3,4-dioxygenase subunit alpha | CFBP5496_RS23420 | Not Available | Negative | 1764386 - 1765006 | 22871.0 |
| protocatechuate 3,4-dioxygenase subunit beta | CFBP5496_RS23425 | Not Available | Negative | 1765009 - 1765749 | 27739.4 |
| 4-carboxymuconolactone decarboxylase | CFBP5496_RS23430 | Not Available | Negative | 1765746 - 1766180 | 15717.5 |
| 3-oxoadipate enol-lactonase | CFBP5496_RS23435 | Not Available | Negative | 1766184 - 1766981 | 28420.1 |
| pca operon transcription factor pcaq | CFBP5496_RS23440 | Not Available | Positive | 1767075 - 1768016 | 33760.2 |
| 4-hydroxybenzoate 3-monooxygenase | CFBP5496_RS23445 | Not Available | Negative | 1768218 - 1769390 | 43905.0 |
| helix-turn-helix domain-containing protein | CFBP5496_RS23450 | Not Available | Positive | 1769508 - 1770431 | 34181.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

