Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium pusense |
| Strain | strain CFBP5496 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | desert soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Cicer arietinum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
620584 bp
Thymine Count
617670 bp
Guanine Count
892235 bp
Cytosine Count
903850 bp
Genome Length
3034339 bp
Protein-coding Genes
2769 genes
Non-Coding Genes
260 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | CFBP5496_RS23355 | Not Available | Negative | 1750452 - 1751375 | 33012.5 |
| abc transporter substrate-binding protein | CFBP5496_RS23360 | Not Available | Negative | 1751452 - 1752987 | 55937.2 |
| abc transporter atp-binding protein | CFBP5496_RS23365 | Not Available | Negative | 1753029 - 1754849 | 66893.6 |
| putative quinol monooxygenase | CFBP5496_RS23370 | Not Available | Positive | 1755330 - 1755632 | 11730.0 |
| bifunctional sugar phosphate isomerase/epimerase/4-hydroxyphenylpyruvate dioxygenase family protein | CFBP5496_RS23375 | Not Available | Negative | 1755696 - 1757597 | 69841.6 |
| tetr/acrr family transcriptional regulator | CFBP5496_RS23380 | Not Available | Positive | 1757719 - 1758414 | 26332.2 |
| type ii 3-dehydroquinate dehydratase | CFBP5496_RS23385 | Not Available | Negative | 1758386 - 1758829 | 16267.4 |
| shikimate dehydrogenase | CFBP5496_RS23390 | Not Available | Negative | 1758826 - 1759695 | 31162.6 |
| amino acid abc transporter atp-binding protein | CFBP5496_RS23395 | Not Available | Negative | 1759899 - 1760660 | 28048.2 |
| transporter substrate-binding domain-containing protein | CFBP5496_RS23400 | Not Available | Negative | 1760674 - 1761513 | 29758.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

