Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium pusense |
| Strain | strain CFBP5496 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | desert soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Cicer arietinum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
620584 bp
Thymine Count
617670 bp
Guanine Count
892235 bp
Cytosine Count
903850 bp
Genome Length
3034339 bp
Protein-coding Genes
2769 genes
Non-Coding Genes
260 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-formyltetrahydrofolate cyclo-ligase | CFBP5496_RS20410 | Not Available | Positive | 1168998 - 1169615 | 22049.5 |
| tigr00282 family metallophosphoesterase | CFBP5496_RS20415 | Not Available | Positive | 1169688 - 1170512 | 29619.3 |
| mbl fold metallo-hydrolase | CFBP5496_RS20420 | Not Available | Positive | 1170625 - 1171467 | 30712.3 |
| pyridoxamine 5'-phosphate oxidase family protein | CFBP5496_RS20425 | Not Available | Negative | 1171505 - 1172008 | 18693.9 |
| yebc/pmpr family dna-binding transcriptional regulator | CFBP5496_RS20430 | Not Available | Positive | 1172207 - 1172953 | 26861.6 |
| llm class flavin-dependent oxidoreductase | CFBP5496_RS20435 | Not Available | Negative | 1173010 - 1174011 | 36560.9 |
| crossover junction endodeoxyribonuclease ruvc | CFBP5496_RS20440 | Not Available | Positive | 1174235 - 1174747 | 18167.2 |
| holliday junction branch migration protein ruva | CFBP5496_RS20445 | Not Available | Positive | 1174777 - 1175394 | 21360.8 |
| holliday junction branch migration dna helicase ruvb | CFBP5496_RS20450 | Not Available | Positive | 1175517 - 1176557 | 38199.3 |
| duf2945 domain-containing protein | CFBP5496_RS20455 | Not Available | Positive | 1176610 - 1176828 | 8107.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

