Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium pusense |
| Strain | strain CFBP5496 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | desert soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Cicer arietinum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
620584 bp
Thymine Count
617670 bp
Guanine Count
892235 bp
Cytosine Count
903850 bp
Genome Length
3034339 bp
Protein-coding Genes
2769 genes
Non-Coding Genes
260 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane lipoprotein omp10 | CFBP5496_RS20210 | Not Available | Negative | 1129197 - 1129571 | 13084.3 |
| homospermidine synthase | CFBP5496_RS20215 | Not Available | Negative | 1129718 - 1131163 | 53704.8 |
| ggdef domain-containing protein | CFBP5496_RS20220 | Not Available | Positive | 1131416 - 1132324 | 34515.1 |
| aminotransferase class iv family protein | CFBP5496_RS20225 | Not Available | Negative | 1132321 - 1132956 | 23704.5 |
| m3 family oligoendopeptidase | CFBP5496_RS20230 | Not Available | Negative | 1133057 - 1134907 | 69009.8 |
| sigma-54-dependent transcriptional regulator | CFBP5496_RS20235 | Not Available | Positive | 1135078 - 1136622 | 55910.2 |
| duf882 domain-containing protein | CFBP5496_RS20240 | Not Available | Positive | 1136940 - 1138703 | 61541.7 |
| pyruvate kinase | CFBP5496_RS20245 | Not Available | Negative | 1138786 - 1140225 | 51366.2 |
| duf1036 domain-containing protein | CFBP5496_RS20250 | Not Available | Negative | 1140225 - 1140707 | 17921.1 |
| n-formylglutamate amidohydrolase | CFBP5496_RS20255 | Not Available | Positive | 1140904 - 1141692 | 29356.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

