Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium pusense |
| Strain | strain CFBP5496 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | desert soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Cicer arietinum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
620584 bp
Thymine Count
617670 bp
Guanine Count
892235 bp
Cytosine Count
903850 bp
Genome Length
3034339 bp
Protein-coding Genes
2769 genes
Non-Coding Genes
260 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent dna methyltransferase | CFBP5496_RS00890 | Not Available | Positive | 165177 - 166118 | 34038.4 |
| yitt family protein | CFBP5496_RS00895 | Not Available | Positive | 166249 - 166860 | 22228.8 |
| yitt family protein | CFBP5496_RS00900 | Not Available | Positive | 166932 - 167573 | 22954.4 |
| carboxymuconolactone decarboxylase family protein | CFBP5496_RS00905 | Not Available | Negative | 167600 - 168061 | 17044.4 |
| rrf2 family transcriptional regulator | CFBP5496_RS00910 | Not Available | Negative | 168169 - 168672 | 17428.2 |
| ligase-associated dna damage response dexh box helicase | CFBP5496_RS00915 | Not Available | Positive | 168722 - 171313 | 96065.2 |
| ligase-associated dna damage response endonuclease pdem | CFBP5496_RS00920 | Not Available | Positive | 171360 - 172088 | 26785.3 |
| universal stress protein | CFBP5496_RS00925 | Not Available | Negative | 172103 - 172540 | 15748.0 |
| tigr02186 family protein | CFBP5496_RS00930 | Not Available | Negative | 172698 - 173525 | 29822.1 |
| sulfite exporter taue/safe family protein | CFBP5496_RS00935 | Not Available | Negative | 173522 - 174448 | 32639.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

