Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium pusense |
| Strain | strain CFBP5496 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | desert soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Cicer arietinum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
620584 bp
Thymine Count
617670 bp
Guanine Count
892235 bp
Cytosine Count
903850 bp
Genome Length
3034339 bp
Protein-coding Genes
2769 genes
Non-Coding Genes
260 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sarcosine oxidase subunit alpha | CFBP5496_RS18590 | Not Available | Negative | 768322 - 771282 | 106580.0 |
| sarcosine oxidase subunit delta | CFBP5496_RS18595 | Not Available | Negative | 771279 - 771593 | 11969.0 |
| hypothetical protein | CFBP5496_RS18600 | Not Available | Negative | 771605 - 772015 | 14640.8 |
| sarcosine oxidase subunit beta family protein | CFBP5496_RS18605 | Not Available | Negative | 772015 - 773268 | 45436.2 |
| 30s ribosomal protein s21 | CFBP5496_RS18610 | Not Available | Positive | 773585 - 773812 | 8925.06 |
| tetratricopeptide repeat protein | CFBP5496_RS18615 | Not Available | Positive | 773946 - 774845 | 32718.9 |
| duf6074 family protein | CFBP5496_RS18620 | Not Available | Negative | 774917 - 775183 | 10037.9 |
| exopolysaccharide production repressor protein | CFBP5496_RS18625 | Not Available | Positive | 775523 - 775801 | 10181.6 |
| glycosyltransferase family 2 protein | CFBP5496_RS18630 | Not Available | Positive | 775911 - 776900 | 36076.1 |
| polysaccharide pyruvyl transferase family protein | CFBP5496_RS18635 | Not Available | Negative | 777079 - 778044 | 35549.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

