Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium pusense |
| Strain | strain CFBP5496 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | desert soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Cicer arietinum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
620584 bp
Thymine Count
617670 bp
Guanine Count
892235 bp
Cytosine Count
903850 bp
Genome Length
3034339 bp
Protein-coding Genes
2769 genes
Non-Coding Genes
260 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2'-deoxycytidine 5'-triphosphate deaminase | CFBP5496_RS00535 | Not Available | Positive | 112598 - 113695 | 39866.9 |
| Trna-gly | Not Available | Not Available | Positive | 113754 - 113827 | Not Available |
| Trna-pseudo | Not Available | Not Available | Positive | 125006 - 125080 | Not Available |
| duf982 domain-containing protein | CFBP5496_RS00805 | Not Available | Positive | 151167 - 151406 | 8528.91 |
| helix-turn-helix domain-containing protein | CFBP5496_RS00810 | Not Available | Negative | 151498 - 151833 | 12562.2 |
| type ii toxin-antitoxin system rele/pare family toxin | CFBP5496_RS00815 | Not Available | Negative | 151830 - 152150 | 11485.8 |
| thermonuclease family protein | CFBP5496_RS00820 | Not Available | Negative | 152354 - 152764 | 14820.9 |
| aquaporin z | CFBP5496_RS00825 | Not Available | Positive | 153073 - 153798 | 24553.3 |
| hypothetical protein | CFBP5496_RS00830 | Not Available | Positive | 153851 - 154144 | 8798.02 |
| glycosyltransferase family 2 protein | CFBP5496_RS00835 | Not Available | Negative | 154327 - 156264 | 72480.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

