Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium pusense |
| Strain | strain CFBP5496 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | desert soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Cicer arietinum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
620584 bp
Thymine Count
617670 bp
Guanine Count
892235 bp
Cytosine Count
903850 bp
Genome Length
3034339 bp
Protein-coding Genes
2769 genes
Non-Coding Genes
260 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate abc transporter permease | CFBP5496_RS17245 | Not Available | Negative | 460496 - 461437 | 34665.3 |
| carbohydrate abc transporter permease | CFBP5496_RS17250 | Not Available | Negative | 461430 - 462332 | 33622.9 |
| abc transporter substrate-binding protein | CFBP5496_RS17255 | Not Available | Negative | 462474 - 463706 | 43406.7 |
| cpbp family intramembrane glutamic endopeptidase | CFBP5496_RS17260 | Not Available | Positive | 463929 - 464651 | 25559.3 |
| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | CFBP5496_RS17265 | Not Available | Negative | 464710 - 466140 | 53206.1 |
| hypothetical protein | CFBP5496_RS17270 | Not Available | Negative | 466137 - 466361 | 8241.37 |
| glucose/quinate/shikimate family membrane-bound pqq-dependent dehydrogenase | CFBP5496_RS17275 | Not Available | Negative | 466418 - 468847 | 85446.0 |
| lysr family transcriptional regulator | CFBP5496_RS17280 | Not Available | Positive | 469247 - 470146 | 32786.1 |
| nadp-dependent malic enzyme | CFBP5496_RS17285 | Not Available | Positive | 470307 - 472595 | 82665.0 |
| transporter substrate-binding domain-containing protein | CFBP5496_RS17290 | Not Available | Positive | 472820 - 473659 | 30036.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

