Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium pusense |
| Strain | strain CFBP5496 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | desert soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Cicer arietinum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
620584 bp
Thymine Count
617670 bp
Guanine Count
892235 bp
Cytosine Count
903850 bp
Genome Length
3034339 bp
Protein-coding Genes
2769 genes
Non-Coding Genes
260 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l,d-transpeptidase | CFBP5496_RS17145 | Not Available | Negative | 443199 - 443984 | 28598.3 |
| murein l,d-transpeptidase family protein | CFBP5496_RS17150 | Not Available | Negative | 444004 - 445059 | 38148.9 |
| sdr family oxidoreductase | CFBP5496_RS17155 | Not Available | Negative | 445235 - 446020 | 27101.4 |
| hypothetical protein | CFBP5496_RS17160 | Not Available | Negative | 446017 - 446415 | 13961.0 |
| dna-3-methyladenine glycosylase | CFBP5496_RS17165 | Not Available | Positive | 446508 - 447092 | 21207.7 |
| hypothetical protein | CFBP5496_RS17170 | Not Available | Negative | 447089 - 447247 | 5836.85 |
| hypothetical protein | CFBP5496_RS17175 | Not Available | Negative | 447478 - 447675 | 7264.34 |
| substrate-binding domain-containing protein | CFBP5496_RS17180 | Not Available | Negative | 447849 - 448862 | 37447.3 |
| abc transporter substrate-binding protein | CFBP5496_RS17185 | Not Available | Positive | 449133 - 450398 | 45426.6 |
| carbohydrate abc transporter permease | CFBP5496_RS17190 | Not Available | Positive | 450462 - 451436 | 35933.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

