Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium pusense |
| Strain | strain CFBP5496 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | desert soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Cicer arietinum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
620584 bp
Thymine Count
617670 bp
Guanine Count
892235 bp
Cytosine Count
903850 bp
Genome Length
3034339 bp
Protein-coding Genes
2769 genes
Non-Coding Genes
260 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | CFBP5496_RS00185 | Not Available | Positive | 38148 - 38567 | 15168.2 |
| methionine adenosyltransferase | CFBP5496_RS00190 | Not Available | Positive | 38759 - 40021 | 45301.8 |
| trna (guanosine(46)-n7)-methyltransferase trmb | CFBP5496_RS00195 | Not Available | Positive | 40191 - 40889 | 26836.9 |
| ribokinase | CFBP5496_RS00200 | Not Available | Negative | 40953 - 41852 | 30302.3 |
| dna recombination protein rmuc | CFBP5496_RS00205 | Not Available | Negative | 41907 - 43100 | 44085.9 |
| peptide deformylase | CFBP5496_RS00210 | Not Available | Positive | 43250 - 43762 | 18993.2 |
| methionyl-trna formyltransferase | CFBP5496_RS00215 | Not Available | Positive | 43808 - 44743 | 33119.4 |
| trna pseudouridine(38-40) synthase trua | CFBP5496_RS00220 | Not Available | Positive | 44743 - 45543 | 29868.4 |
| hypothetical protein | CFBP5496_RS00225 | Not Available | Negative | 45556 - 46152 | 22453.5 |
| succinyl-diaminopimelate desuccinylase | CFBP5496_RS00230 | Not Available | Negative | 46136 - 47332 | 42562.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

