Agrobacterium pusense strain CFBP5496

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Agrobacterium pusense strain CFBP5496 is a Gram-negative bacterium characterized by its rod shape and the presence of flagella, which facilitates motility. This strain possesses two replicons, indicating a complex genomic structure that may contribute to its adaptability and genetic diversity. The genomic information for this strain can be accessed through the following accession numbers: NZ_CP116735.1 and NZ_CP116736.1. As a member of the Agrobacterium genus, A. pusense is likely involved in interactions with plants, particularly in the context of plant-microbe symbiosis or pathogenicity. The presence of flagella suggests that this strain is capable of active movement, which could enhance its ability to colonize plant surfaces or invade plant tissues. Understanding the traits of Agrobacterium pusense strain CFBP5496 can provide insights into its potential ecological roles. For instance, its Gram-negative nature and motility may facilitate interactions with the rhizosphere, influencing nutrient cycling and plant health. Additionally, the presence of two replicons may indicate evolutionary advantages, such as the ability to adapt to various environmental conditions or host plants. Further research on this strain could shed light on its specific ecological functions and applications in agriculture or biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium pusense
Strainstrain CFBP5496

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Agrobacterium pusense strain CFBP5496
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatdesert soil; rhizosphere
Biotic relationshipNot Available
Host(s)Homo sapiens, Oryza sativa, Cicer arietinum
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium pusense strain CFBP5496 chromosome Circular,

Gene Summary

Adenine Count

620584 bp

Thymine Count

617670 bp

Guanine Count

892235 bp

Cytosine Count

903850 bp

Genome Length

3034339 bp

Protein-coding Genes

2769 genes

Non-Coding Genes

260 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf1513 domain-containing proteinCFBP5496_RS14785Not AvailableNegative2957758 - 295885239383.6
imelysin family proteinCFBP5496_RS14790Not AvailableNegative2958857 - 295997840801.7
di-heme oxidoredictase family proteinCFBP5496_RS14795Not AvailableNegative2959978 - 296150155190.1
imelysin family proteinCFBP5496_RS14800Not AvailableNegative2961563 - 296284045704.5
rsmb/nop family class i sam-dependent rna methyltransferaseCFBP5496_RS14805Not AvailableNegative2962995 - 296428447307.7
septal ring lytic transglycosylase rlpa family proteinCFBP5496_RS14810Not AvailableNegative2964346 - 296471112682.5
sdr family oxidoreductaseCFBP5496_RS14815Not AvailableNegative2965140 - 296601231416.5
trna epoxyqueuosine(34) reductase quegCFBP5496_RS14820Not AvailableNegative2966016 - 296716742868.1
glutathione s-transferase family proteinCFBP5496_RS14825Not AvailableNegative2967246 - 296793826742.0
undecaprenyl-diphosphate phosphataseCFBP5496_RS14830Not AvailablePositive2968097 - 296890328541.0

Displaying genes 2961 – 2970 of 4894 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.