Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium pusense |
| Strain | strain CFBP5496 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | desert soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Cicer arietinum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
620584 bp
Thymine Count
617670 bp
Guanine Count
892235 bp
Cytosine Count
903850 bp
Genome Length
3034339 bp
Protein-coding Genes
2769 genes
Non-Coding Genes
260 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts iia-like nitrogen regulatory protein ptsn | CFBP5496_RS00035 | Not Available | Negative | 6274 - 6735 | 16431.9 |
| ribosome hibernation-promoting factor, hpf/yfia family | CFBP5496_RS00040 | Not Available | Negative | 6818 - 7390 | 21069.8 |
| rna polymerase factor sigma-54 | CFBP5496_RS00045 | Not Available | Negative | 7625 - 9175 | 56796.1 |
| lps export abc transporter atp-binding protein | CFBP5496_RS00050 | Not Available | Negative | 9329 - 10114 | 28510.4 |
| lpta/osta family protein | CFBP5496_RS00055 | Not Available | Negative | 10148 - 10711 | 19998.0 |
| lps export abc transporter periplasmic protein lptc | CFBP5496_RS00060 | Not Available | Negative | 10725 - 11390 | 23804.7 |
| signal peptide peptidase sppa | CFBP5496_RS00065 | Not Available | Positive | 11624 - 12577 | 34855.2 |
| integration host factor subunit beta | CFBP5496_RS00070 | Not Available | Positive | 12604 - 12906 | 11295.3 |
| lapa family protein | CFBP5496_RS00075 | Not Available | Positive | 12970 - 13311 | 12404.5 |
| class i sam-dependent methyltransferase | CFBP5496_RS00080 | Not Available | Positive | 13405 - 14538 | 41829.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

