Agrobacterium pusense strain CFBP5496

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Agrobacterium pusense strain CFBP5496 is a Gram-negative bacterium characterized by its rod shape and the presence of flagella, which facilitates motility. This strain possesses two replicons, indicating a complex genomic structure that may contribute to its adaptability and genetic diversity. The genomic information for this strain can be accessed through the following accession numbers: NZ_CP116735.1 and NZ_CP116736.1. As a member of the Agrobacterium genus, A. pusense is likely involved in interactions with plants, particularly in the context of plant-microbe symbiosis or pathogenicity. The presence of flagella suggests that this strain is capable of active movement, which could enhance its ability to colonize plant surfaces or invade plant tissues. Understanding the traits of Agrobacterium pusense strain CFBP5496 can provide insights into its potential ecological roles. For instance, its Gram-negative nature and motility may facilitate interactions with the rhizosphere, influencing nutrient cycling and plant health. Additionally, the presence of two replicons may indicate evolutionary advantages, such as the ability to adapt to various environmental conditions or host plants. Further research on this strain could shed light on its specific ecological functions and applications in agriculture or biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium pusense
Strainstrain CFBP5496

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Agrobacterium pusense strain CFBP5496
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatdesert soil; rhizosphere
Biotic relationshipNot Available
Host(s)Homo sapiens, Oryza sativa, Cicer arietinum
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium pusense strain CFBP5496 chromosome Circular,

Gene Summary

Adenine Count

620584 bp

Thymine Count

617670 bp

Guanine Count

892235 bp

Cytosine Count

903850 bp

Genome Length

3034339 bp

Protein-coding Genes

2769 genes

Non-Coding Genes

260 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trna pseudouridine(55) synthase trubCFBP5496_RS13835Not AvailableNegative2769341 - 277028834790.6
30s ribosome-binding factor rbfaCFBP5496_RS13840Not AvailableNegative2770292 - 277070815643.7
translation initiation factor if-2CFBP5496_RS13845Not AvailableNegative2770843 - 277357899173.1
rna-binding proteinCFBP5496_RS13850Not AvailableNegative2773681 - 277438225104.0
transcription termination factor nusaCFBP5496_RS13855Not AvailableNegative2774379 - 277599560193.1
ribosome maturation factor rimpCFBP5496_RS13860Not AvailableNegative2776059 - 277665522010.1
mfs transporterCFBP5496_RS13865Not AvailablePositive2776943 - 277857159496.1
lytic murein transglycosylaseCFBP5496_RS13870Not AvailableNegative2778749 - 278001445582.4
recombination mediator recrCFBP5496_RS13875Not AvailableNegative2780054 - 278065921415.1
mosc domain-containing proteinCFBP5496_RS13880Not AvailablePositive2780697 - 278133223149.3

Displaying genes 2771 – 2780 of 4894 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.