Agrobacterium pusense strain CFBP5496

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Agrobacterium pusense strain CFBP5496 is a Gram-negative bacterium characterized by its rod shape and the presence of flagella, which facilitates motility. This strain possesses two replicons, indicating a complex genomic structure that may contribute to its adaptability and genetic diversity. The genomic information for this strain can be accessed through the following accession numbers: NZ_CP116735.1 and NZ_CP116736.1. As a member of the Agrobacterium genus, A. pusense is likely involved in interactions with plants, particularly in the context of plant-microbe symbiosis or pathogenicity. The presence of flagella suggests that this strain is capable of active movement, which could enhance its ability to colonize plant surfaces or invade plant tissues. Understanding the traits of Agrobacterium pusense strain CFBP5496 can provide insights into its potential ecological roles. For instance, its Gram-negative nature and motility may facilitate interactions with the rhizosphere, influencing nutrient cycling and plant health. Additionally, the presence of two replicons may indicate evolutionary advantages, such as the ability to adapt to various environmental conditions or host plants. Further research on this strain could shed light on its specific ecological functions and applications in agriculture or biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium pusense
Strainstrain CFBP5496

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Agrobacterium pusense strain CFBP5496
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatdesert soil; rhizosphere
Biotic relationshipNot Available
Host(s)Homo sapiens, Oryza sativa, Cicer arietinum
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium pusense strain CFBP5496 chromosome Circular,

Gene Summary

Adenine Count

620584 bp

Thymine Count

617670 bp

Guanine Count

892235 bp

Cytosine Count

903850 bp

Genome Length

3034339 bp

Protein-coding Genes

2769 genes

Non-Coding Genes

260 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
actr/prra/rega family redox response regulator transcription factorCFBP5496_RS13685Not AvailableNegative2734457 - 273504421617.7
two-component system sensor histidine kinase actsCFBP5496_RS13690Not AvailableNegative2735114 - 273642147756.0
atp-dependent helicase hrpbCFBP5496_RS13695Not AvailableNegative2736448 - 273893489598.8
16s ribosomal rnaNot AvailableNot AvailablePositive2739596 - 2741080Not Available
Trna-ileNot AvailableNot AvailablePositive2741395 - 2741471Not Available
Trna-alaNot AvailableNot AvailablePositive2741531 - 2741606Not Available
23s ribosomal rnaNot AvailableNot AvailablePositive2742102 - 2744900Not Available
5s ribosomal rnaNot AvailableNot AvailablePositive2745165 - 2745279Not Available
Trna-metNot AvailableNot AvailablePositive2745499 - 2745575Not Available
dna helicase recqCFBP5496_RS13730Not AvailablePositive2745978 - 274777766821.3

Displaying genes 2741 – 2750 of 4894 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.