Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium pusense |
| Strain | strain CFBP5496 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | desert soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Cicer arietinum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
620584 bp
Thymine Count
617670 bp
Guanine Count
892235 bp
Cytosine Count
903850 bp
Genome Length
3034339 bp
Protein-coding Genes
2769 genes
Non-Coding Genes
260 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l27 | CFBP5496_RS13185 | Not Available | Negative | 2629579 - 2629848 | 9414.28 |
| 50s ribosomal protein l21 | CFBP5496_RS13190 | Not Available | Negative | 2629889 - 2630203 | 11366.9 |
| metallopeptidase family protein | CFBP5496_RS13195 | Not Available | Positive | 2630536 - 2630976 | 16814.5 |
| duf1737 domain-containing protein | CFBP5496_RS13200 | Not Available | Negative | 2630996 - 2631202 | 7503.94 |
| hpch/hpai aldolase/citrate lyase family protein | CFBP5496_RS13205 | Not Available | Negative | 2631199 - 2632110 | 33448.6 |
| hypothetical protein | CFBP5496_RS13210 | Not Available | Positive | 2632221 - 2632451 | 8067.19 |
| 3-isopropylmalate dehydratase small subunit | CFBP5496_RS13215 | Not Available | Positive | 2632613 - 2633218 | 22058.2 |
| 3-isopropylmalate dehydrogenase | CFBP5496_RS13220 | Not Available | Positive | 2633489 - 2634601 | 39605.9 |
| cytochrome-c peroxidase | CFBP5496_RS13225 | Not Available | Negative | 2634582 - 2635829 | 44863.8 |
| cobyrinate a,c-diamide synthase | CFBP5496_RS13230 | Not Available | Negative | 2636029 - 2637345 | 46010.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

