Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium pusense |
| Strain | strain CFBP5496 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | desert soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Cicer arietinum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
620584 bp
Thymine Count
617670 bp
Guanine Count
892235 bp
Cytosine Count
903850 bp
Genome Length
3034339 bp
Protein-coding Genes
2769 genes
Non-Coding Genes
260 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ile | Not Available | Not Available | Positive | 2360683 - 2360759 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 2361074 - 2362558 | Not Available |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | CFBP5496_RS12045 | Not Available | Positive | 2363139 - 2364089 | 36076.9 |
| tetr/acrr family transcriptional regulator | CFBP5496_RS12050 | Not Available | Positive | 2364092 - 2364751 | 24516.8 |
| efflux rnd transporter periplasmic adaptor subunit | CFBP5496_RS12055 | Not Available | Positive | 2364950 - 2366152 | 42725.6 |
| efflux rnd transporter permease subunit | CFBP5496_RS12060 | Not Available | Positive | 2366207 - 2369296 | 110033.0 |
| efflux transporter outer membrane subunit | CFBP5496_RS12065 | Not Available | Positive | 2369446 - 2370891 | 50926.3 |
| elongation factor p | CFBP5496_RS12070 | Not Available | Negative | 2371009 - 2371578 | 21063.1 |
| ef-p lysine aminoacylase epma | CFBP5496_RS12075 | Not Available | Positive | 2371829 - 2372893 | 39250.3 |
| lysine-2,3-aminomutase-like protein | CFBP5496_RS12080 | Not Available | Positive | 2372890 - 2373954 | 38792.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

