Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium pusense |
| Strain | strain CFBP5496 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | desert soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Cicer arietinum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
620584 bp
Thymine Count
617670 bp
Guanine Count
892235 bp
Cytosine Count
903850 bp
Genome Length
3034339 bp
Protein-coding Genes
2769 genes
Non-Coding Genes
260 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Major capsid protein | CFBP5496_RS08220 | Not Available | Negative | 1600737 - 1601945 | 43031.8 |
| Capsid protein | CFBP5496_RS08225 | Not Available | Negative | 1601958 - 1603076 | 39300.7 |
| Portal protein | CFBP5496_RS08230 | Not Available | Negative | 1603086 - 1604315 | 44877.2 |
| Terminase large subunit | CFBP5496_RS08235 | Not Available | Negative | 1604340 - 1605983 | 60338.2 |
| Terminase small subunit | CFBP5496_RS08240 | Not Available | Negative | 1605996 - 1606451 | 16514.5 |
| hypothetical protein | CFBP5496_RS08245 | Not Available | Negative | 1606578 - 1606901 | 12441.5 |
| Hnh endonuclease | CFBP5496_RS25975 | Not Available | Negative | 1606901 - 1607068 | 6093.27 |
| Hypothetical protein | CFBP5496_RS08255 | Not Available | Negative | 1607205 - 1607366 | 5493.35 |
| Trna-met; | Not Available | Not Available | Positive | 1607532 - 1607608 | Not Available |
| P107 | CFBP5496_RS08265 | Not Available | Negative | 1607733 - 1608482 | 27332.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

