Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium pusense |
| Strain | strain CFBP5496 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | desert soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Cicer arietinum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
620584 bp
Thymine Count
617670 bp
Guanine Count
892235 bp
Cytosine Count
903850 bp
Genome Length
3034339 bp
Protein-coding Genes
2769 genes
Non-Coding Genes
260 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent clp protease proteolytic subunit | CFBP5496_RS10630 | Not Available | Negative | 2067460 - 2068041 | 21376.6 |
| hupe/urej family protein | CFBP5496_RS10635 | Not Available | Positive | 2068275 - 2068865 | 19609.4 |
| duf2076 domain-containing protein | CFBP5496_RS10640 | Not Available | Positive | 2068966 - 2069718 | 25440.7 |
| preq(1) synthase | CFBP5496_RS10645 | Not Available | Negative | 2069744 - 2070208 | 17073.4 |
| cation diffusion facilitator family transporter | CFBP5496_RS10650 | Not Available | Negative | 2070225 - 2071127 | 31651.8 |
| glyoxalase superfamily protein | CFBP5496_RS10655 | Not Available | Negative | 2071287 - 2071685 | 15133.1 |
| branched-chain amino acid abc transporter substrate-binding protein | CFBP5496_RS10660 | Not Available | Negative | 2071753 - 2072856 | 37646.8 |
| duf3095 domain-containing protein | CFBP5496_RS10665 | Not Available | Positive | 2073143 - 2074318 | 42195.5 |
| arsr/smtb family transcription factor | CFBP5496_RS10670 | Not Available | Negative | 2074447 - 2074767 | 11508.9 |
| choline abc transporter atp-binding protein | CFBP5496_RS10675 | Not Available | Negative | 2075305 - 2076351 | 37437.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

