Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium pusense |
| Strain | strain CFBP5496 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | desert soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Cicer arietinum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
620584 bp
Thymine Count
617670 bp
Guanine Count
892235 bp
Cytosine Count
903850 bp
Genome Length
3034339 bp
Protein-coding Genes
2769 genes
Non-Coding Genes
260 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramoylalanyl-d-glutamyl-2, 6-diaminopimelate--d-alanyl-d-alanine ligase | CFBP5496_RS09830 | Not Available | Negative | 1891972 - 1893405 | 50713.0 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | CFBP5496_RS09835 | Not Available | Negative | 1893402 - 1894871 | 51467.4 |
| peptidoglycan d,d-transpeptidase ftsi family protein | CFBP5496_RS09840 | Not Available | Negative | 1894929 - 1896671 | 62865.6 |
| hypothetical protein | CFBP5496_RS09845 | Not Available | Negative | 1896671 - 1897228 | 19709.9 |
| 16s rrna (cytosine(1402)-n(4))-methyltransferase rsmh | CFBP5496_RS09850 | Not Available | Negative | 1897230 - 1898255 | 36430.7 |
| division/cell wall cluster transcriptional repressor mraz | CFBP5496_RS09855 | Not Available | Negative | 1898270 - 1898710 | 16044.1 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 1899112 - 1899513 | Not Available |
| nad(p)/fad-dependent oxidoreductase | CFBP5496_RS09865 | Not Available | Negative | 1899570 - 1900760 | 42286.1 |
| fad-dependent oxidoreductase | CFBP5496_RS09870 | Not Available | Negative | 1900821 - 1902008 | 42101.1 |
| lytic transglycosylase domain-containing protein | CFBP5496_RS09875 | Not Available | Negative | 1902097 - 1902636 | 19397.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

