Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium pusense |
| Strain | strain CFBP5496 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | desert soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Cicer arietinum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
620584 bp
Thymine Count
617670 bp
Guanine Count
892235 bp
Cytosine Count
903850 bp
Genome Length
3034339 bp
Protein-coding Genes
2769 genes
Non-Coding Genes
260 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| elongation factor tu | CFBP5496_RS09080 | Not Available | Negative | 1748315 - 1749490 | 42626.2 |
| elongation factor g | CFBP5496_RS09085 | Not Available | Negative | 1749556 - 1751655 | 77974.2 |
| 30s ribosomal protein s7 | CFBP5496_RS09090 | Not Available | Negative | 1751690 - 1752160 | 17682.2 |
| 30s ribosomal protein s12 | CFBP5496_RS09095 | Not Available | Negative | 1752237 - 1752608 | 14002.3 |
| hypothetical protein | CFBP5496_RS09100 | Not Available | Positive | 1753136 - 1753429 | 10604.2 |
| voc family protein | CFBP5496_RS09105 | Not Available | Positive | 1753442 - 1753792 | 12678.1 |
| helix-turn-helix transcriptional regulator | CFBP5496_RS09110 | Not Available | Positive | 1753889 - 1754974 | 39487.6 |
| dna-directed rna polymerase subunit beta' | CFBP5496_RS09115 | Not Available | Negative | 1755113 - 1759321 | 155314.0 |
| dna-directed rna polymerase subunit beta | CFBP5496_RS09120 | Not Available | Negative | 1759502 - 1763638 | 153714.0 |
| 50s ribosomal protein l7/l12 | CFBP5496_RS09125 | Not Available | Negative | 1763902 - 1764279 | 12760.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

