Agrobacterium pusense strain CFBP5496

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Agrobacterium pusense strain CFBP5496 is a Gram-negative bacterium characterized by its rod shape and the presence of flagella, which facilitates motility. This strain possesses two replicons, indicating a complex genomic structure that may contribute to its adaptability and genetic diversity. The genomic information for this strain can be accessed through the following accession numbers: NZ_CP116735.1 and NZ_CP116736.1. As a member of the Agrobacterium genus, A. pusense is likely involved in interactions with plants, particularly in the context of plant-microbe symbiosis or pathogenicity. The presence of flagella suggests that this strain is capable of active movement, which could enhance its ability to colonize plant surfaces or invade plant tissues. Understanding the traits of Agrobacterium pusense strain CFBP5496 can provide insights into its potential ecological roles. For instance, its Gram-negative nature and motility may facilitate interactions with the rhizosphere, influencing nutrient cycling and plant health. Additionally, the presence of two replicons may indicate evolutionary advantages, such as the ability to adapt to various environmental conditions or host plants. Further research on this strain could shed light on its specific ecological functions and applications in agriculture or biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium pusense
Strainstrain CFBP5496

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Agrobacterium pusense strain CFBP5496
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatdesert soil; rhizosphere
Biotic relationshipNot Available
Host(s)Homo sapiens, Oryza sativa, Cicer arietinum
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium pusense strain CFBP5496 chromosome Circular,

Gene Summary

Adenine Count

620584 bp

Thymine Count

617670 bp

Guanine Count

892235 bp

Cytosine Count

903850 bp

Genome Length

3034339 bp

Protein-coding Genes

2769 genes

Non-Coding Genes

260 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
protein-methionine-sulfoxide reductase catalytic subunit msrpCFBP5496_RS08930Not AvailablePositive1730965 - 173190634930.8
protein-methionine-sulfoxide reductase heme-binding subunit msrqCFBP5496_RS08935Not AvailablePositive1731909 - 173257425052.8
hypothetical proteinCFBP5496_RS08940Not AvailablePositive1732571 - 173289111704.0
50s ribosomal protein l17CFBP5496_RS08945Not AvailableNegative1732974 - 173339915362.6
dna-directed rna polymerase subunit alphaCFBP5496_RS08950Not AvailableNegative1733518 - 173452837143.4
30s ribosomal protein s11CFBP5496_RS08955Not AvailableNegative1734724 - 173511313879.7
30s ribosomal protein s13CFBP5496_RS08960Not AvailableNegative1735252 - 173562013751.0
adenylate kinaseCFBP5496_RS08965Not AvailableNegative1735920 - 173651021163.4
preprotein translocase subunit secyCFBP5496_RS08970Not AvailableNegative1736507 - 173784747691.3
50s ribosomal protein l15CFBP5496_RS08975Not AvailableNegative1738176 - 173865516545.2

Displaying genes 1791 – 1800 of 4894 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.