Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium pusense |
| Strain | strain CFBP5496 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | desert soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Cicer arietinum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
620584 bp
Thymine Count
617670 bp
Guanine Count
892235 bp
Cytosine Count
903850 bp
Genome Length
3034339 bp
Protein-coding Genes
2769 genes
Non-Coding Genes
260 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ycjf family protein | CFBP5496_RS05780 | Not Available | Negative | 1125710 - 1126789 | 38321.6 |
| ycjx family protein | CFBP5496_RS05785 | Not Available | Negative | 1126786 - 1128264 | 54169.8 |
| sixa phosphatase family protein | CFBP5496_RS05790 | Not Available | Negative | 1128392 - 1128868 | 17339.3 |
| rna polymerase-binding protein dksa | CFBP5496_RS05795 | Not Available | Positive | 1129171 - 1129590 | 16136.9 |
| flagellar biosynthetic protein flio | CFBP5496_RS05800 | Not Available | Negative | 1129689 - 1130936 | 43588.0 |
| hypothetical protein | CFBP5496_RS05805 | Not Available | Negative | 1131050 - 1131172 | 4450.45 |
| cell cycle histidine kinase ccka | CFBP5496_RS05810 | Not Available | Positive | 1131596 - 1134184 | 94867.9 |
| atp-dependent clp protease adapter clps | CFBP5496_RS05815 | Not Available | Positive | 1134469 - 1134825 | 13560.5 |
| atp-dependent clp protease atp-binding subunit clpa | CFBP5496_RS05820 | Not Available | Positive | 1134836 - 1137343 | 91712.6 |
| azlc family abc transporter permease | CFBP5496_RS05825 | Not Available | Positive | 1137490 - 1138266 | 27873.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

