Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium pusense |
| Strain | strain CFBP5496 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | desert soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Cicer arietinum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
620584 bp
Thymine Count
617670 bp
Guanine Count
892235 bp
Cytosine Count
903850 bp
Genome Length
3034339 bp
Protein-coding Genes
2769 genes
Non-Coding Genes
260 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| holliday junction resolvase ruvx | CFBP5496_RS05580 | Not Available | Negative | 1085303 - 1085782 | 17181.0 |
| zinc ribbon domain-containing protein yjdm | CFBP5496_RS05585 | Not Available | Negative | 1085797 - 1086099 | 10959.9 |
| metal-dependent hydrolase | CFBP5496_RS05590 | Not Available | Positive | 1086184 - 1086888 | 24842.4 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatc | CFBP5496_RS05595 | Not Available | Positive | 1087013 - 1087300 | 10261.3 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gata | CFBP5496_RS05600 | Not Available | Positive | 1087355 - 1088836 | 52714.7 |
| gnat family n-acetyltransferase | CFBP5496_RS05605 | Not Available | Positive | 1088857 - 1089330 | 17416.9 |
| yjhx family toxin | CFBP5496_RS05610 | Not Available | Negative | 1089387 - 1089644 | 9808.06 |
| gnat family n-acetyltransferase | CFBP5496_RS05615 | Not Available | Positive | 1089918 - 1090427 | 18972.3 |
| duf1294 domain-containing protein | CFBP5496_RS05620 | Not Available | Negative | 1090409 - 1090741 | 12361.5 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatb | CFBP5496_RS05625 | Not Available | Positive | 1090893 - 1092398 | 54732.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

