Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium pusense |
| Strain | strain CFBP5496 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | desert soil; rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Cicer arietinum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
620584 bp
Thymine Count
617670 bp
Guanine Count
892235 bp
Cytosine Count
903850 bp
Genome Length
3034339 bp
Protein-coding Genes
2769 genes
Non-Coding Genes
260 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lps export abc transporter permease lptg | CFBP5496_RS04630 | Not Available | Negative | 892506 - 893594 | 39448.6 |
| lptf/lptg family permease | CFBP5496_RS04635 | Not Available | Negative | 893591 - 894760 | 42878.5 |
| leucyl aminopeptidase | CFBP5496_RS04640 | Not Available | Positive | 895059 - 896552 | 52397.2 |
| dna polymerase iii subunit chi | CFBP5496_RS04645 | Not Available | Positive | 896578 - 897027 | 17197.1 |
| sensor domain-containing diguanylate cyclase | CFBP5496_RS04650 | Not Available | Positive | 897170 - 898198 | 37232.7 |
| gfo/idh/moca family protein | CFBP5496_RS04655 | Not Available | Negative | 898227 - 899153 | 33843.2 |
| sensor domain-containing diguanylate cyclase | CFBP5496_RS04660 | Not Available | Positive | 899456 - 900661 | 44598.5 |
| ggdef domain-containing phosphodiesterase | CFBP5496_RS04665 | Not Available | Positive | 900769 - 902709 | 71777.0 |
| sensor histidine kinase | CFBP5496_RS04670 | Not Available | Positive | 902830 - 904536 | 61034.8 |
| response regulator transcription factor | CFBP5496_RS04675 | Not Available | Positive | 904533 - 905141 | 21971.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

