Bdellovibrio sp. SKB1291214

Kingdom

Pseudomonadati

Phylum

Bdellovibrionota

Class

Bdellovibrionia

Order

Bdellovibrionales

Family

Pseudobdellovibrionaceae

Genus

Bdellovibrio

Description

Bdellovibrio sp. SKB1291214 is a Gram-negative bacterium primarily found in soil environments. This organism is characterized by the presence of flagella, which facilitate motility. Notably, it possesses a single replicon, indicating a simpler genetic structure that may contribute to its adaptability in various ecological niches. The significance of Bdellovibrio sp. SKB1291214 lies in its ecological role as a predator of other bacteria. This predatory behavior positions it as a potential biocontrol agent in microbial communities, where it may help regulate bacterial populations and contribute to nutrient cycling in soil ecosystems. By preying on other bacteria, Bdellovibrio sp. SKB1291214 can influence the composition of microbial communities, potentially impacting soil health and fertility. The genetic information for this organism is cataloged under the accession NZ_CP106855.1, providing a resource for further studies into its genetics and metabolic capabilities. Overall, the presence of Bdellovibrio sp. SKB1291214 in soil highlights the intricate dynamics of microbial life and its significance in maintaining ecological balance within terrestrial environments.

Taxonomy

KingdomPseudomonadati
PhylumBdellovibrionota
ClassBdellovibrionia
OrderBdellovibrionales
FamilyPseudobdellovibrionaceae
GenusBdellovibrio
SpeciesBdellovibrio sp. SKB1291214
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsoil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bdellovibrio sp. SKB1291214 chromosome, complete genome.

Gene Summary

Adenine Count

1017125 bp

Thymine Count

1015572 bp

Guanine Count

819339 bp

Cytosine Count

829152 bp

Genome Length

3681188 bp

Protein-coding Genes

3578 genes

Non-Coding Genes

39 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
methyl-accepting chemotaxis proteinB9G69_RS01010Not AvailablePositive203618 - 20544166245.8
lysm peptidoglycan-binding domain-containing proteinB9G69_RS01015Not AvailablePositive205686 - 20695745338.9
lamg-like jellyroll fold domain-containing proteinB9G69_RS01020Not AvailablePositive206954 - 213079207843.0
ssra-binding protein smpbB9G69_RS01025Not AvailableNegative213076 - 21353417629.4
16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsmaB9G69_RS01030Not AvailableNegative213537 - 21436131023.7
trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsadB9G69_RS01035Not AvailableNegative214358 - 21539537216.8
tetratricopeptide repeat proteinB9G69_RS01040Not AvailableNegative215403 - 21609826398.1
duf4398 domain-containing proteinB9G69_RS01045Not AvailableNegative216095 - 21640611684.0
peptidoglycan-associated lipoprotein palB9G69_RS01050Not AvailableNegative216424 - 21692417548.8
pd40 domain-containing proteinB9G69_RS01055Not AvailablePositive217057 - 220014110680.0

Displaying genes 201 – 210 of 3617 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.