Bdellovibrio sp. SKB1291214

Kingdom

Pseudomonadati

Phylum

Bdellovibrionota

Class

Bdellovibrionia

Order

Bdellovibrionales

Family

Pseudobdellovibrionaceae

Genus

Bdellovibrio

Description

Bdellovibrio sp. SKB1291214 is a Gram-negative bacterium primarily found in soil environments. This organism is characterized by the presence of flagella, which facilitate motility. Notably, it possesses a single replicon, indicating a simpler genetic structure that may contribute to its adaptability in various ecological niches. The significance of Bdellovibrio sp. SKB1291214 lies in its ecological role as a predator of other bacteria. This predatory behavior positions it as a potential biocontrol agent in microbial communities, where it may help regulate bacterial populations and contribute to nutrient cycling in soil ecosystems. By preying on other bacteria, Bdellovibrio sp. SKB1291214 can influence the composition of microbial communities, potentially impacting soil health and fertility. The genetic information for this organism is cataloged under the accession NZ_CP106855.1, providing a resource for further studies into its genetics and metabolic capabilities. Overall, the presence of Bdellovibrio sp. SKB1291214 in soil highlights the intricate dynamics of microbial life and its significance in maintaining ecological balance within terrestrial environments.

Taxonomy

KingdomPseudomonadati
PhylumBdellovibrionota
ClassBdellovibrionia
OrderBdellovibrionales
FamilyPseudobdellovibrionaceae
GenusBdellovibrio
SpeciesBdellovibrio sp. SKB1291214
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsoil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bdellovibrio sp. SKB1291214 chromosome, complete genome.

Gene Summary

Adenine Count

1017125 bp

Thymine Count

1015572 bp

Guanine Count

819339 bp

Cytosine Count

829152 bp

Genome Length

3681188 bp

Protein-coding Genes

3578 genes

Non-Coding Genes

39 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
aminoglycoside phosphotransferase family proteinB9G69_RS00560Not AvailableNegative114366 - 11525333680.7
dopa 4,5-dioxygenase family proteinB9G69_RS00565Not AvailableNegative115278 - 11565814660.5
d-glycero-beta-d-manno-heptose-7-phosphate kinaseB9G69_RS00570Not AvailableNegative115801 - 11682936873.1
alpha-ketoglutarate-dependent dioxygenase alkbB9G69_RS00575Not AvailablePositive116935 - 11784335360.0
s1 family peptidaseB9G69_RS00580Not AvailablePositive117920 - 11886733614.7
gmc family oxidoreductase n-terminal domain-containing proteinB9G69_RS00585Not AvailableNegative118851 - 12059363742.2
hypothetical proteinB9G69_RS00590Not AvailableNegative120663 - 12237864788.1
glu/leu/phe/val family dehydrogenaseB9G69_RS00595Not AvailablePositive122492 - 12376646238.8
quinone-dependent dihydroorotate dehydrogenaseB9G69_RS00600Not AvailablePositive123866 - 12485236207.7
8-oxo-dgtp diphosphatase muttB9G69_RS00605Not AvailablePositive124839 - 12529717413.1

Displaying genes 111 – 120 of 3617 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.