Xanthomonas citri pv. durantae strain LMG696

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Xanthomonas

Description

Xanthomonas citri pv. durantae strain LMG696 is a Gram-negative bacterium characterized by its rod-shaped morphology. This strain possesses flagella, which contribute to its motility, allowing it to navigate through its environment effectively. The genomic composition of X. citri pv. durantae strain LMG696 includes three replicons, indicating a complex genomic structure that may facilitate various physiological functions and adaptability. The strain has been cataloged with specific genomic accessions: NZ_CP066344.1, NZ_CP066347.1, and NZ_CP066346.1. These accessions provide critical information for researchers, enabling access to the complete genomic sequences necessary for further studies on its pathogenicity, genetic diversity, and potential applications in plant health management. Understanding the traits of Xanthomonas citri pv. durantae strain LMG696 is essential for studying its interactions with host plants and the environment. The presence of flagella suggests that this bacterium may play an active role in colonization and infection processes. As a pathogen, it is particularly relevant in the context of agricultural microbiology, where it can affect the health of crops. Its adaptability and genetic complexity may also provide insights into its ecological interactions, including its potential for survival in diverse environments and its impact on plant disease dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusXanthomonas
SpeciesXanthomonas citri
Strainpv. durantae strain LMG696

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Xanthomonas citri pv. durantae strain LMG696
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xanthomonas citri pv. durantae strain LMG696 plasmid pLMG696-3,

Gene Summary

Adenine Count

7327 bp

Thymine Count

8527 bp

Guanine Count

13437 bp

Cytosine Count

12706 bp

Genome Length

41997 bp

Protein-coding Genes

47 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinXdur_RS23970Not AvailableNegative11529 - 117056704.45
trbc/virb2 family proteinXdur_RS23975Not AvailableNegative11797 - 1211711084.9
atpase, t2ss/t4p/t4ss familyXdur_RS23980Not AvailableNegative12190 - 1319437255.7
helix-turn-helix domain-containing proteinXdur_RS23985Not AvailableNegative13284 - 134937681.59
type ii toxin-antitoxin system rele/pare family toxinXdur_RS23990Not AvailablePositive13845 - 1418312801.3
helix-turn-helix domain-containing proteinXdur_RS23995Not AvailablePositive14180 - 1446110329.6
hypothetical proteinXdur_RS24000Not AvailableNegative15145 - 1596630142.2
hypothetical proteinXdur_RS24005Not AvailableNegative16482 - 1687113936.4
plasmid pria4b orf-3 family proteinXdur_RS24010Not AvailableNegative16967 - 1750620353.3
hypothetical proteinXdur_RS24015Not AvailableNegative17539 - 1803018144.7

Displaying genes 11 – 20 of 159 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.