Thalassomonas actiniarum strain A5K-106

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Colwelliaceae

Genus

Thalassomonas

Description

Thalassomonas actiniarum strain A5K-106 is characterized by having two replicons, which is indicative of its genetic complexity and adaptability. The strain is cataloged in two specific GenBank accessions: NZ_CP059736.1 and NZ_CP059735.1. These accessions provide a framework for understanding its genetic makeup and potential functions within its ecological niche. As a member of the Thalassomonas genus, T. actiniarum is likely adapted to marine environments, reflecting the ecological roles such microorganisms play in oceanic ecosystems. The two replicons may offer advantages such as enhanced gene regulation and stability, which can be beneficial in fluctuating marine conditions. This genetic versatility allows for a range of metabolic processes, enabling the strain to thrive in diverse environments. The presence of two replicons in T. actiniarum strain A5K-106 suggests a potential for varied responses to environmental changes, including nutrient availability and competition with other microbial communities. Understanding the genetic architecture of this strain can provide insights into its ecological roles, including its contributions to biogeochemical cycles and interactions within marine microbiomes. Overall, the genomic information linked to the strain underscores its importance in marine microbiology and its potential applications in understanding marine ecosystem dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyColwelliaceae
GenusThalassomonas
SpeciesThalassomonas actiniarum
Strainstrain A5K-106

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thalassomonas actiniarum strain A5K-106 chromosome, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
yigz family proteinSG35_RS00050Not AvailablePositive13280 - 1389722048.3
trkh family potassium uptake proteinSG35_RS00055Not AvailablePositive13933 - 1538452658.6
trk system potassium transporter trkaSG35_RS00060Not AvailableNegative15473 - 1684950097.7
16s rrna (cytosine(967)-c(5))-methyltransferase rsmbSG35_RS00065Not AvailableNegative16902 - 1820648319.1
methionyl-trna formyltransferaseSG35_RS00070Not AvailableNegative18214 - 1920335574.7
peptide deformylaseSG35_RS00075Not AvailableNegative19237 - 1975219307.3
lysm peptidoglycan-binding domain-containing proteinSG35_RS00080Not AvailablePositive19892 - 2095939544.7
dna-processing protein dpraSG35_RS00085Not AvailablePositive21036 - 2213639592.1
duf494 family proteinSG35_RS00090Not AvailablePositive22139 - 2261218469.9
type i dna topoisomeraseSG35_RS00095Not AvailablePositive22765 - 2332821161.6

Displaying genes 71 – 80 of 6405 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.